lcl|VRMN01000001.1_cds_KAA8497499.1_6452 (KAA8497499)

Aliases : KAA8497499

Description : Zinc finger, CCHC-type [Interproscan].

Gene families : OG_01_0005627 (OrthoFinder) Phylogenetic Tree(s): OG0005627_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|VRMN01000001.1_cds_KAA8497499.1_6452
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method	Actions
lcl\|VRMN01000001.1_cds_KAA8499397.1_8350	KAA8499397	Hypothetical protein	0.19	OrthoFinder
lcl\|VRMN01000002.1_cds_KAA8497382.1_1111	KAA8497382	Zinc finger, CCHC-type [Interproscan].	0.08	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
BP	GO:0015074	DNA integration	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	345	360

External Links

No external refs found!