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  5. lcl|VRMN01000001.1_cds_KAA8497491.1_6444

lcl|VRMN01000001.1_cds_KAA8497491.1_6444 (KAA8497491)


Aliases : KAA8497491

Description : Hypothetical protein


Gene families : OG_01_0002022 (OrthoFinder) Phylogenetic Tree(s): OG0002022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8497491.1_6444
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000002.1_cds_KAA8496303.1_32 KAA8496303 Hypothetical protein 0.05 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496361.1_90 KAA8496361 Hypothetical protein 0.09 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496445.1_174 KAA8496445 Hypothetical protein 0.1 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495216.1_1214 KAA8495216 Hypothetical protein 0.29 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494429.1_2959 KAA8494429 Hypothetical protein 0.07 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494760.1_3290 KAA8494760 Hypothetical protein 0.07 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493110.1_9411 KAA8493110 Hypothetical protein 0.12 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8493098.1_2834 KAA8493098 Hypothetical protein 0.07 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492039.1_5222 KAA8492039 Hypothetical protein 0.17 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492077.1_5260 KAA8492077 Hypothetical protein 0.09 OrthoFinder
lcl|VRMN01000014.1_cds_KAA8491276.1_2277 KAA8491276 Hypothetical protein 0.11 OrthoFinder
lcl|VRMN01000014.1_cds_KAA8491317.1_2318 KAA8491317 Hypothetical protein 0.12 OrthoFinder
lcl|VRMN01000019.1_cds_KAA8490755.1_6011 KAA8490755 Hypothetical protein 0.15 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006313 transposition, DNA-mediated IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
BP GO:0032196 transposition IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!