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  5. PTI_33G00170.1

PTI_33G00170.1


Description : Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan].


Gene families : OG_01_0000476 (OrthoFinder) Phylogenetic Tree(s): OG0000476_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_33G00170.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.67 tig00000076_g2367.t1 Cyclin-A2-1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cz15g07190.t1 No alias Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.02 OrthoFinder
EOD13446 No alias Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.02 OrthoFinder
Sro103_g052500.1 Contig308.g4047 B-type cyclin 0.04 OrthoFinder
Sro251_g099220.1 Contig687.g8002 B-type cyclin 0.05 OrthoFinder
Sro781_g201590.1 Contig678.g7942 B-type cyclin 0.02 OrthoFinder
TP10G00850.1 No alias Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR006671 Cyclin_N 335 394
IPR006671 Cyclin_N 250 293
IPR004367 Cyclin_C-dom 397 524
No external refs found!