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  5. PTI_31G01010.1

PTI_31G01010.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000022 (OrthoFinder) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_31G01010.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
PTI_00G00670.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_00G00790.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_00G00820.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_00G00840.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G00850.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G01680.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_00G01850.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_00G01860.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G01910.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_00G02260.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_00G03300.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G03310.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_00G03350.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_00G03360.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G03380.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G03760.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G03770.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G03790.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_03G00410.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_03G04530.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_03G04540.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_04G00240.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_04G05890.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_05G04500.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_06G00010.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_06G03560.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_06G03570.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_06G05180.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_07G01130.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_07G04550.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_08G00940.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_08G04530.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_08G04540.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_08G04550.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_08G04560.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_08G04590.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_11G00010.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_11G00060.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_11G00070.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_11G00080.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_11G00120.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_11G00140.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_11G00160.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_11G00170.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_11G00180.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_11G04480.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_11G04490.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_11G04530.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_13G00100.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_13G00110.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_13G00130.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_13G00140.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_14G01280.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_14G01290.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_14G02440.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_14G02450.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_14G03550.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_16G00070.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_17G02240.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_17G02980.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_18G00030.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_18G00040.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_18G00050.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_18G00310.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_18G00350.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_19G03130.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_22G00420.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_22G00430.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_22G00450.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_24G01610.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_27G00080.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_29G00100.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_29G00130.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_29G00620.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_29G00630.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_29G01340.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_30G00040.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_30G00050.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_30G00060.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_30G00070.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_30G00090.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_31G00130.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_31G00150.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_31G00160.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_31G00170.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_33G00010.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_33G00260.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 1363 1561
No external refs found!