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  5. PTI_31G00190.1

PTI_31G00190.1


Description : Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; CobW/HypB/UreG, nucleotide-binding domain; Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000066 (OrthoFinder) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_31G00190.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
PTI_00G00190.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_03G05930.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_05G04520.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_10G01700.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_15G00010.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_16G00090.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_17G02300.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_18G02850.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_20G00030.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_20G00040.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_20G00050.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_20G00060.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_20G00070.1 No alias Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Enrichment
MF GO:0005516 calmodulin binding IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR003495 CobW/HypB/UreG_dom 1928 2111
IPR011629 Cbl_biosynth_CobW-like_C 2156 2248
IPR013103 RVT_2 1306 1523
No external refs found!