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Description : Mechanosensitive ion channel MscS [Interproscan].
Gene families : OG_01_0000453 (OrthoFinder) Phylogenetic Tree(s): OG0000453_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_30G00430.1 | |
| Cluster | HCCA: Cluster_105 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro1206_g252380.1 | Contig178.g2094 | Mechanosensitive ion channel protein | 0.01 | OrthoFinder | |
| Sro9_g007600.1 | Contig4120.g31528 | Mechanosensitive ion channel protein | 0.02 | OrthoFinder | |
| Sro9_g007660.1 | Contig4120.g31534 | Mechanosensitive ion channel protein | 0.02 | OrthoFinder | |
| lcl|LHPG02000004.1_cds_PRW58872.1_6881 | PRW58872 | Mechanosensitive ion channel 10 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | Interproscan |
| BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0003333 | amino acid transmembrane transport | IEP | Enrichment |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
| MF | GO:0004560 | alpha-L-fucosidase activity | IEP | Enrichment |
| BP | GO:0006536 | glutamate metabolic process | IEP | Enrichment |
| BP | GO:0006537 | glutamate biosynthetic process | IEP | Enrichment |
| BP | GO:0006865 | amino acid transport | IEP | Enrichment |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Enrichment |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015297 | antiporter activity | IEP | Enrichment |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Enrichment |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Enrichment |
| BP | GO:0015849 | organic acid transport | IEP | Enrichment |
| MF | GO:0015928 | fucosidase activity | IEP | Enrichment |
| MF | GO:0015930 | glutamate synthase activity | IEP | Enrichment |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
| BP | GO:0019915 | lipid storage | IEP | Enrichment |
| MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0030246 | carbohydrate binding | IEP | Enrichment |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Enrichment |
| BP | GO:0043650 | dicarboxylic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0051235 | maintenance of location | IEP | Enrichment |
| MF | GO:0098599 | palmitoyl hydrolase activity | IEP | Enrichment |
| BP | GO:1903825 | organic acid transmembrane transport | IEP | Enrichment |
| BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006685 | MscS_channel | 948 | 1095 |
| No external refs found! |