1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_29G00690.1

PTI_29G00690.1


Description : AP-4 complex subunit epsilon-1, C-terminal; Clathrin/coatomer adaptor, adaptin-like, N-terminal [Interproscan].


Gene families : OG_01_0003038 (OrthoFinder) Phylogenetic Tree(s): OG0003038_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_29G00690.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Cre06.g310000 30779094, AP4E1 Vesicle trafficking.endomembrane trafficking.vacuolar... 0.03 OrthoFinder
Cz17g10080.t1 No alias Clathrin/coatomer adaptor, adaptin-like, N-terminal... 0.02 OrthoFinder
Dusal.0070s00041.1 33189321 Clathrin/coatomer adaptor, adaptin-like, N-terminal... 0.02 OrthoFinder
EOD06219 No alias Clathrin/coatomer adaptor, adaptin-like, N-terminal... 0.02 OrthoFinder
EOD28102 No alias Adaptor protein complex 4, subunit epsilon [Ensembl]. 0.03 OrthoFinder
OT_12G00530.1 No alias Clathrin/coatomer adaptor, adaptin-like, N-terminal... 0.02 OrthoFinder
Sro908_g218840.1 Contig954.g9847 AP-4 complex subunit epsilon 0.06 OrthoFinder
TP07G04250.1 No alias AP-4 complex subunit epsilon-1, C-terminal [Interproscan]. 0.02 OrthoFinder
TP07G04260.1 No alias Clathrin/coatomer adaptor, adaptin-like, N-terminal... 0.03 OrthoFinder
XM_002503113.1 MICPUN_83194, 83194 Clathrin/coatomer adaptor, adaptin-like, N-terminal... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Enrichment
MF GO:0004560 alpha-L-fucosidase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006595 polyamine metabolic process IEP Enrichment
BP GO:0006596 polyamine biosynthetic process IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0008216 spermidine metabolic process IEP Enrichment
BP GO:0008295 spermidine biosynthetic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009309 amine biosynthetic process IEP Enrichment
MF GO:0015928 fucosidase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
CC GO:0030173 integral component of Golgi membrane IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
CC GO:0031228 intrinsic component of Golgi membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
CC GO:0031390 Ctf18 RFC-like complex IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 30 594
IPR028269 AP4E1_C 966 1070
No external refs found!