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  5. PTI_29G00090.1

PTI_29G00090.1


Description : Glycoside hydrolase family 1; Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000066 (OrthoFinder) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_29G00090.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
PTI_00G01920.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.01 OrthoFinder
PTI_00G04610.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_01G08060.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_01G08070.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_01G11820.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_03G00510.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_03G00520.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_03G05910.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_03G05920.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_03G05930.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_04G00260.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_05G04520.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_08G00160.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.02 OrthoFinder
PTI_09G00400.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_09G02870.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_10G01700.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_15G00010.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_16G00030.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_16G00090.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_16G00100.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_17G02300.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_18G01250.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_20G00040.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_20G00070.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_25G00030.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_27G00060.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_31G00090.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_31G00960.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0004057 arginyltransferase activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
BP GO:0016598 protein arginylation IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
MF GO:0043531 ADP binding IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 1767 2215
IPR013103 RVT_2 1095 1311
No external refs found!