PTI_29G00070.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000066 (OrthoFinder) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_29G00070.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
PTI_00G00190.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_00G01000.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_00G01660.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_00G02200.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_00G02270.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_00G02280.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_00G02470.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_00G04600.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_01G01660.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_01G05240.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
PTI_01G08060.1 No alias Hypothetical protein 0.17 OrthoFinder
PTI_01G08070.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_01G08080.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_01G11800.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_01G11820.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.11 OrthoFinder
PTI_03G00500.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.12 OrthoFinder
PTI_03G05880.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_03G05930.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_03G05950.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_03G05970.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_05G04520.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_06G01810.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_08G00160.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
PTI_09G01520.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.08 OrthoFinder
PTI_09G01550.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_09G01560.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_09G02860.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.1 OrthoFinder
PTI_10G01700.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_11G00020.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_11G04470.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.08 OrthoFinder
PTI_12G02220.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_12G02230.1 No alias Hypothetical protein 0.17 OrthoFinder
PTI_15G00010.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_16G00080.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_16G00090.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_16G00750.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
PTI_16G02500.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_16G02510.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.1 OrthoFinder
PTI_18G00100.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.09 OrthoFinder
PTI_18G02830.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_18G02840.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_18G02850.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_18G02900.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_18G02920.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.12 OrthoFinder
PTI_20G00030.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_20G00040.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_20G00050.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_20G00060.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_20G00070.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_20G00080.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_22G02660.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_23G02270.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_24G00370.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_24G01870.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_27G00060.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.1 OrthoFinder
PTI_27G01660.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_27G01670.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_31G00950.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.1 OrthoFinder
PTI_33G00250.1 No alias Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013103 RVT_2 312 397
IPR013103 RVT_2 202 295
No external refs found!