1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_28G00940.1

PTI_28G00940.1


Description : Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain; Anticodon-binding [Interproscan].


Gene families : OG_01_0000761 (OrthoFinder) Phylogenetic Tree(s): OG0000761_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_28G00940.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Cre02.g142352 30785235 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 OrthoFinder
EOD19932 No alias Histidyl-tRNA synthetase [Ensembl]. 0.01 OrthoFinder
EOD37895 No alias Class II Histidinyl-tRNA synthetase (HisRS)-like... 0.02 OrthoFinder
OT_11G03340.1 No alias Anticodon-binding; Class II Histidinyl-tRNA synthetase... 0.03 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494724.1_3254 KAA8494724 Histidine--tRNA ligase, cytoplasmic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Enrichment
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004560 alpha-L-fucosidase activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006480 N-terminal protein amino acid methylation IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006595 polyamine metabolic process IEP Enrichment
BP GO:0006596 polyamine biosynthetic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
BP GO:0008216 spermidine metabolic process IEP Enrichment
BP GO:0008295 spermidine biosynthetic process IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009309 amine biosynthetic process IEP Enrichment
MF GO:0015928 fucosidase activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0019107 myristoyltransferase activity IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
BP GO:0031365 N-terminal protein amino acid modification IEP Enrichment
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR041715 HisRS-like_core 83 387
IPR004154 Anticodon-bd 414 501
No external refs found!