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  5. PTI_28G00480.1

PTI_28G00480.1


Description : Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan].


Gene families : OG_01_0000152 (OrthoFinder) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_28G00480.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Sro1228_g254370.1 Contig2695.g21738 Cyclin-B2 0.02 OrthoFinder
TP02G02500.1 No alias Hypothetical protein 0.02 OrthoFinder
TP02G09980.1 No alias Cyclin, N-terminal [Interproscan]. 0.03 OrthoFinder
TP03G01530.1 No alias Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.02 OrthoFinder
TP13G00170.1 No alias Cyclin, N-terminal [Interproscan]. 0.06 OrthoFinder
TP17G01540.1 No alias Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.02 OrthoFinder
TP19G02130.1 No alias Cyclin, N-terminal [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 170 231
IPR006671 Cyclin_N 64 166
No external refs found!