PTI_27G00410.1


Description : EF-hand domain [Interproscan].


Gene families : OG_01_0000037 (OrthoFinder) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_27G00410.1
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000692.65 tig00000692_g3264.t1 Calmodulin-2 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder
Cpa|evm.model.tig00021435.47 tig00021435_g21427.t1 Calmodulin OS=Mougeotia scalaris 0.02 OrthoFinder
Cre03.g150300 30787530 Calmodulin-3 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cre11.g468450 30775984 RNA processing.messenger ribonucleoprotein particle... 0.07 OrthoFinder
Cz01g28170.t1 No alias EF-hand domain [Interproscan]. 0.01 OrthoFinder
Cz14g12250.t1 No alias EF-hand domain pair; EF-hand domain [Interproscan]. 0.01 OrthoFinder
Dusal.0080s00002.1 33203946 EF-hand domain [Interproscan]. 0.02 OrthoFinder
Sro1012_g231150.1 Contig304.g3985 Calmodulin-5/6/7/8 0.04 OrthoFinder
Sro2020_g311360.1 Contig280.g3625 Myosin light chain 1/3, skeletal muscle isoform 0.04 OrthoFinder
Sro321_g116830.1 Contig56.g439 Putative calmodulin-like protein 0.03 OrthoFinder
TP07G01950.1 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
TP07G01960.1 No alias EF-hand domain [Interproscan]. 0.05 OrthoFinder
Transcript_contig_59375 59375 EF-hand domain pair; EF-hand domain [Interproscan]. 0.01 OrthoFinder
XM_002503574.1 MICPUN_60109, 60109 EF-hand domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0015708 silicic acid import across plasma membrane IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
BP GO:0098657 import into cell IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098661 inorganic anion transmembrane transport IEP Enrichment
BP GO:0098739 import across plasma membrane IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 83 146
IPR002048 EF_hand_dom 13 73
No external refs found!