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  5. PTI_27G00030.1

PTI_27G00030.1


Description : ABC transporter-like; ABC-2 type transporter [Interproscan].


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_27G00030.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001130.22 tig00001130_g7252.t1 ABC transporter G family member 22 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz06g03250.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
EOD16849 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.01 OrthoFinder
OT_04G00620.1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.03 OrthoFinder
Sro538_g162620.1 Contig95.g1103 Putative white-brown complex homolog protein 30 0.03 OrthoFinder
SymbC1.scaffold441.7 441.7 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold609.10 609.10 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
TP14G03100.1 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.03 OrthoFinder
Transcript_contig_53730 53730 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0019781 NEDD8 activating enzyme activity IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0045116 protein neddylation IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 63 217
IPR013525 ABC_2_trans 362 572
No external refs found!