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Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].
Gene families : OG_01_0000022 (OrthoFinder) Phylogenetic Tree(s): OG0000022_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_26G01640.1 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| PTI_00G00670.1 | No alias | Hypothetical protein | 0.09 | OrthoFinder | |
| PTI_00G00760.1 | No alias | Hypothetical protein | 0.1 | OrthoFinder | |
| PTI_00G00790.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_00G00820.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_00G01930.1 | No alias | Hypothetical protein | 0.09 | OrthoFinder | |
| PTI_00G03300.1 | No alias | Hypothetical protein | 0.11 | OrthoFinder | |
| PTI_00G03370.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_00G03380.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_00G03790.1 | No alias | Hypothetical protein | 0.11 | OrthoFinder | |
| PTI_01G04550.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_01G05400.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_02G00010.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_02G04470.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.06 | OrthoFinder | |
| PTI_03G04530.1 | No alias | Hypothetical protein | 0.09 | OrthoFinder | |
| PTI_03G04560.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_04G00240.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_05G04500.1 | No alias | Hypothetical protein | 0.1 | OrthoFinder | |
| PTI_06G03570.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_07G00170.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.04 | OrthoFinder | |
| PTI_07G01130.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_08G04530.1 | No alias | Hypothetical protein | 0.08 | OrthoFinder | |
| PTI_08G04540.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_08G04560.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_08G04590.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_11G00060.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_11G00070.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_11G00100.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_11G00110.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.04 | OrthoFinder | |
| PTI_11G00140.1 | No alias | Hypothetical protein | 0.09 | OrthoFinder | |
| PTI_11G04500.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_11G04530.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_13G00100.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_13G00110.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_13G00120.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_13G00140.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.13 | OrthoFinder | |
| PTI_13G02530.1 | No alias | Hypothetical protein | 0.09 | OrthoFinder | |
| PTI_14G02130.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.08 | OrthoFinder | |
| PTI_14G02460.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_16G00070.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_18G00030.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.05 | OrthoFinder | |
| PTI_18G00050.1 | No alias | Hypothetical protein | 0.11 | OrthoFinder | |
| PTI_18G00060.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_18G00310.1 | No alias | Hypothetical protein | 0.1 | OrthoFinder | |
| PTI_18G00340.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_18G00350.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_18G00360.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_18G00370.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_19G03130.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_21G02780.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_22G00420.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_22G00430.1 | No alias | Hypothetical protein | 0.13 | OrthoFinder | |
| PTI_24G01610.1 | No alias | Hypothetical protein | 0.11 | OrthoFinder | |
| PTI_26G00300.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_26G00310.1 | No alias | Hypothetical protein | 0.1 | OrthoFinder | |
| PTI_26G00320.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_27G00080.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.1 | OrthoFinder | |
| PTI_27G00290.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.04 | OrthoFinder | |
| PTI_29G00100.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.05 | OrthoFinder | |
| PTI_29G00120.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_29G00130.1 | No alias | Hypothetical protein | 0.08 | OrthoFinder | |
| PTI_29G00620.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_29G01340.1 | No alias | Hypothetical protein | 0.1 | OrthoFinder | |
| PTI_30G00040.1 | No alias | Hypothetical protein | 0.11 | OrthoFinder | |
| PTI_30G00050.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.04 | OrthoFinder | |
| PTI_31G00140.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_31G00160.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_31G00170.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| MF | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | IEP | Enrichment |
| BP | GO:0006555 | methionine metabolic process | IEP | Enrichment |
| BP | GO:0006772 | thiamine metabolic process | IEP | Enrichment |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Enrichment |
| MF | GO:0008172 | S-methyltransferase activity | IEP | Enrichment |
| BP | GO:0009086 | methionine biosynthetic process | IEP | Enrichment |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | Enrichment |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Enrichment |
| MF | GO:0042085 | 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Enrichment |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013103 | RVT_2 | 1290 | 1517 |
| No external refs found! |