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  5. PTI_26G00870.1

PTI_26G00870.1


Description : Ribosomal protein S8 [Interproscan].


Gene families : OG_01_0003009 (OrthoFinder) Phylogenetic Tree(s): OG0003009_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_26G00870.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000158.110 tig00000158_g10212.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.29 OrthoFinder
Cre05.g234637 30782975 Protein biosynthesis.cytosolic ribosome.small subunit... 0.44 OrthoFinder
Cz14g19140.t1 No alias Ribosomal protein S8 [Interproscan]. 0.29 OrthoFinder
Dusal.0068s00005.1 33187240 Ribosomal protein S8 [Interproscan]. 0.14 OrthoFinder
EOD16196 No alias Ribosomal protein S8 [Ensembl]. 0.05 OrthoFinder
EOD40032 No alias Ribosomal protein S8 [Ensembl]. 0.16 OrthoFinder
OT_01G02380.1 No alias Ribosomal protein S8 [Interproscan]. 0.23 OrthoFinder
Sro60_g034790.1 Contig797.g8956 40S ribosomal protein S15a 0.47 OrthoFinder
SymbC1.scaffold3882.8 3882.8 Ribosomal protein S8 [Interproscan]. 0.06 OrthoFinder
TP10G03670.1 No alias Ribosomal protein S8 [Interproscan]. 0.37 OrthoFinder
Transcript_contig_80036 80036 Ribosomal protein S8 [Interproscan]. 0.03 OrthoFinder
Vocar.0008s0416.1 32897070 Ribosomal protein S8 [Interproscan]. 0.02 OrthoFinder
XM_002507541.1 MICPUN_107532, 107532 Ribosomal protein S8 [Interproscan]. 0.23 OrthoFinder
XM_003056509.1 MicpuC2_31862, 31862 Ribosomal protein S8 [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01000519.1_cds_GFH12596.1_7073 HaLaN_08309, GFH12596 40S ribosomal protein S15a 0.14 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58777.1_7006 PRW58777 40S ribosomal S15a-1 0.3 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495085.1_3615 KAA8495085 40S ribosomal protein S15a 0.21 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004512 inositol-3-phosphate synthase activity IEP Enrichment
BP GO:0006020 inositol metabolic process IEP Enrichment
BP GO:0006021 inositol biosynthetic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006448 regulation of translational elongation IEP Enrichment
BP GO:0006449 regulation of translational termination IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009891 positive regulation of biosynthetic process IEP Enrichment
BP GO:0009893 positive regulation of metabolic process IEP Enrichment
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
BP GO:0010628 positive regulation of gene expression IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0031325 positive regulation of cellular metabolic process IEP Enrichment
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0045727 positive regulation of translation IEP Enrichment
BP GO:0045901 positive regulation of translational elongation IEP Enrichment
BP GO:0045905 positive regulation of translational termination IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051130 positive regulation of cellular component organization IEP Enrichment
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051247 positive regulation of protein metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000630 Ribosomal_S8 7 130
No external refs found!