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  5. Cpa|evm.model.tig00000204.62

Cpa|evm.model.tig00000204.62 (tig00000204_g17729.t1)


Aliases : tig00000204_g17729.t1

No description available


Gene families : OG_01_0000109 (OrthoFinder) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000204.62
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Cre06.g303400 30779939, FAP16 No description available 0.02 OrthoFinder
EOD39577 No alias HELP [Interproscan]. 0.01 OrthoFinder
Vocar.0013s0017.1 32896445 WD40 repeat; HELP; Anaphase-promoting complex subunit 4,... 0.02 OrthoFinder
Vocar.0029s0133.1 32887586 WD40 repeat [Interproscan]. 0.01 OrthoFinder
XM_002502455.1 MICPUN_58565, 58565 HELP; PLAT/LH2 domain; WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_003056890.1 MicpuC2_56546, 56546 PLAT/LH2 domain; HELP [Interproscan]. 0.02 OrthoFinder
XM_003059760.1 MicpuC2_18351, 18351 HELP; WD40 repeat [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000485.1_cds_GFH12276.1_6753 HaLaN_07928, GFH12276 WD40 repeat [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0004363 glutathione synthase activity IEP Enrichment
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004629 phospholipase C activity IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006750 glutathione biosynthetic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 1801 1830
IPR001680 WD40_repeat 1663 1695
IPR000253 FHA_dom 1107 1161
IPR001611 Leu-rich_rpt 400 422
IPR001611 Leu-rich_rpt 310 329
IPR001611 Leu-rich_rpt 372 386
No external refs found!