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  5. PTI_25G01160.1

PTI_25G01160.1


Description : DnaJ domain; Chlorophyll A-B binding protein [Interproscan].


Gene families : OG_01_0000059 (OrthoFinder) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_25G01160.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
EOD04043 No alias Light harvesting protein [Ensembl]. 0.04 OrthoFinder
EOD04179 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
EOD06381 No alias Light harvesting protein [Ensembl]. 0.03 OrthoFinder
EOD08888 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD09088 No alias Light harvesting protein [Ensembl]. 0.03 OrthoFinder
EOD13767 No alias Light harvesting protein [Ensembl]. 0.03 OrthoFinder
EOD17483 No alias Light harvesting protein [Ensembl]. 0.03 OrthoFinder
EOD19212 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
EOD28786 No alias Light harvesting protein [Ensembl]. 0.03 OrthoFinder
EOD31146 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD35505 No alias Light harvesting protein [Ensembl]. 0.04 OrthoFinder
EOD38673 No alias Lught harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD41827 No alias Light harvesting protein [Ensembl]. 0.07 OrthoFinder
Sro1043_g234820.1 Contig3084.g24573 Fucoxanthin-chlorophyll a-c binding protein 0.03 OrthoFinder
Sro1292_g260040.1 Contig3668.g28345 Fucoxanthin-chlorophyll a-c binding protein 0.03 OrthoFinder
Sro137_g064500.1 Contig3969.g30465 Fucoxanthin-chlorophyll a-c binding protein 0.03 OrthoFinder
Sro147_g067990.1 Contig246.g3022 Chloroplastic 0.03 OrthoFinder
Sro2004_g310410.1 Contig2826.g22657 Fucoxanthin-chlorophyll a-c binding protein 0.03 OrthoFinder
Sro238_g095650.1 Contig99.g1211 Fucoxanthin-chlorophyll a-c binding protein 0.03 OrthoFinder
Sro267_g103520.1 Contig4506.g33814 Fucoxanthin-chlorophyll a-c binding protein 0.03 OrthoFinder
Sro2721_g335500.1 Contig3512.g27204 Fucoxanthin-chlorophyll a-c binding protein 0.03 OrthoFinder
Sro31_g020150.1 Contig420.g5610 Fucoxanthin-chlorophyll a-c binding protein A, chloroplastic 0.03 OrthoFinder
Sro326_g118250.1 Contig1080.g10513 Fucoxanthin-chlorophyll a-c binding protein 0.03 OrthoFinder
Sro376_g129680.1 Contig3640.g28118 Fucoxanthin-chlorophyll a-c binding protein 0.05 OrthoFinder
Sro533_g161680.1 Contig3819.g29336 Fucoxanthin-chlorophyll a-c binding protein 0.03 OrthoFinder
Sro6_g005380.1 Contig175.g2043 Fucoxanthin-chlorophyll a-c binding protein 0.03 OrthoFinder
Sro6_g005400.1 Contig175.g2045 Fucoxanthin-chlorophyll a-c binding protein 0.03 OrthoFinder
Sro720_g192680.1 Contig2421.g19829 Fucoxanthin-chlorophyll a-c binding protein 0.04 OrthoFinder
Sro7_g006410.1 Contig389.g5294 Fucoxanthin-chlorophyll a-c binding protein 0.03 OrthoFinder
Sro823_g207590.1 Contig3379.g26446 Fucoxanthin-chlorophyll a-c binding protein 0.03 OrthoFinder
SymbC1.scaffold5622.1 5622.1 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold5657.2 5657.2 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold6938.2 6938.2 Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
TP01G10180.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
TP02G08060.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
TP03G01950.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
TP03G01960.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
TP05G02100.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
TP20G01530.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
TP20G01560.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
TP22G01060.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
TP22G02570.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
BP GO:0006544 glycine metabolic process IEP Enrichment
BP GO:0006546 glycine catabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009071 serine family amino acid catabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 229 297
IPR022796 Chloroa_b-bind 41 192
No external refs found!