1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_25G00630.1

PTI_25G00630.1


Description : Rab-GTPase-TBC domain [Interproscan].


Gene families : OG_01_0012342 (OrthoFinder) Phylogenetic Tree(s): OG0012342_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_25G00630.1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Sro1703_g292310.1 Contig3129.g24836 TBC1 domain family, member 5 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 185 344
No external refs found!