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  5. PTI_24G01570.1

PTI_24G01570.1


Description : RAVE complex protein Rav1 C-terminal [Interproscan].


Gene families : OG_01_0003006 (OrthoFinder) Phylogenetic Tree(s): OG0003006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_24G01570.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
EOD09442 No alias RAVE complex protein Rav1 C-terminal [Interproscan]. 0.02 OrthoFinder
OT_07G02040.1 No alias RAVE complex protein Rav1 C-terminal [Interproscan]. 0.03 OrthoFinder
PTI_24G01580.1 No alias RAVE complex protein Rav1 C-terminal [Interproscan]. 0.03 OrthoFinder
Sro117_g057430.1 Contig3937.g30187 DmX-like protein 2 0.08 OrthoFinder
TP23G00020.1 No alias SH2 domain; RAVE complex protein Rav1 C-terminal [Interproscan]. 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR022033 Rav1p_C 1496 1669
No external refs found!