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  5. PTI_24G01320.1

PTI_24G01320.1


Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0003004 (OrthoFinder) Phylogenetic Tree(s): OG0003004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_24G01320.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Sro6_g005140.1 Contig175.g2019 Protein ligase synoviolin 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 410 452
No external refs found!