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  5. PTI_24G01170.1

PTI_24G01170.1


Description : ABC-2 family transporter protein; ABC transporter-like [Interproscan].


Gene families : OG_01_0000157 (OrthoFinder) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_24G01170.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cre03.g151400 30787934 Solute transport.primary active transport.ABC... 0.01 OrthoFinder
Cre14.g618400 30776085 Solute transport.primary active transport.ABC... 0.01 OrthoFinder
Sro224_g091680.1 Contig758.g8622 Retinal-specific ATP-binding cassette transporter 0.02 OrthoFinder
Sro239_g095950.1 Contig3063.g24391 Retinal-specific ATP-binding cassette transporter 0.01 OrthoFinder
Sro3288_g346250.1 Contig2970.g23594 Retinal-specific ATP-binding cassette transporter 0.01 OrthoFinder
Sro419_g138990.1 Contig4415.g33160 Retinal-specific ATP-binding cassette transporter 0.02 OrthoFinder
Transcript_contig_59645 59645 Hypothetical protein 0.01 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44292.1_2126 PRW44292 ABC transporter A family member 7-like isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0005384 manganese ion transmembrane transporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0030026 cellular manganese ion homeostasis IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032879 regulation of localization IEP Enrichment
BP GO:0032880 regulation of protein localization IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050708 regulation of protein secretion IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0051046 regulation of secretion IEP Enrichment
BP GO:0051049 regulation of transport IEP Enrichment
BP GO:0051223 regulation of protein transport IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055071 manganese ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0070201 regulation of establishment of protein localization IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1903530 regulation of secretion by cell IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 620 773
IPR003439 ABC_transporter-like_ATP-bd 1554 1698
No external refs found!