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  5. PTI_24G00260.1

PTI_24G00260.1


Description : ABC transporter-like; ABC-2 type transporter [Interproscan].


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_24G00260.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020685.31 tig00020685_g12947.t1 ABC transporter G family member 22 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00020902.3 tig00020902_g14946.t1 ABC transporter G family member 5 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cz01g44030.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Cz03g22070.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Cz09g11220.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
OT_10G01520.1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
OT_14G01920.1 No alias ABC-2 type transporter [Interproscan]. 0.02 OrthoFinder
Sro2145_g316370.1 Contig2950.g23391 Putative white-brown complex homolog protein 30 0.03 OrthoFinder
SymbC1.scaffold4237.3 4237.3 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.05 OrthoFinder
XM_003063563.1 MicpuC2_36543, 36543 ATP-binding cassette superfamily 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 170 324
IPR013525 ABC_2_trans 466 676
No external refs found!