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  5. PTI_23G01600.1

PTI_23G01600.1


Description : Helicase-associated [Interproscan].


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_23G01600.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Sro2089_g313960.1 Contig3733.g28633 Helicase 0.02 OrthoFinder
Sro368_g127940.1 Contig2761.g22233 Helicase 0.02 OrthoFinder
Sro8_g006850.1 Contig89.g998 Helicase 0.01 OrthoFinder
TP03G07370.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder
TP07G05740.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 289 348
IPR005114 Helicase_assoc 217 281
IPR005114 Helicase_assoc 355 421
No external refs found!