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  5. PTI_23G01280.1

PTI_23G01280.1


Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_23G01280.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Cre06.g288450 30778465 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
EOD04076 No alias Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
EOD30504 No alias PA domain; Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Sro126_g060610.1 Contig82.g878 Protein ligase RNF181 0.03 OrthoFinder
TP02G01130.1 No alias Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
Vocar.0011s0053.1 32895230 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
CC GO:0030014 CCR4-NOT complex IEP Enrichment
CC GO:0030896 checkpoint clamp complex IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 106 148
No external refs found!