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  5. PTI_23G00250.1

PTI_23G00250.1


Description : PRMT5, oligomerisation domain; PRMT5, TIM barrel domain; PRMT5 arginine-N-methyltransferase [Interproscan].


Gene families : OG_01_0003317 (OrthoFinder) Phylogenetic Tree(s): OG0003317_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_23G00250.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Cre03.g176550 30786560 External stimuli response.drought.stomatal closure... 0.03 OrthoFinder
Cz01g15150.t1 No alias PRMT5, oligomerisation domain; PRMT5, TIM barrel domain;... 0.03 OrthoFinder
TP12G00480.1 No alias PRMT5, oligomerisation domain; PRMT5, TIM barrel domain;... 0.03 OrthoFinder
XM_003057233.1 MicpuC2_45363, 45363 PRMT5, oligomerisation domain; PRMT5, TIM barrel domain;... 0.02 OrthoFinder
lcl|BLLF01005435.1_cds_GFH31197.1_25674 HaLaN_30186, GFH31197 Protein arginine N-methyltransferase 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56786.1_9777 PRW56786 Arginine N-methyltransferase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR035248 PRMT5_C 525 740
IPR035075 PRMT5 345 511
IPR035247 PRMT5_TIM 132 330
No external refs found!