PTI_22G02440.1


Description : Helicase-associated [Interproscan].


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_22G02440.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Sro1031_g233430.1 Contig1465.g13452 Helicase 0.02 OrthoFinder
Sro1285_g259300.1 Contig851.g9358 Helicase 0.05 OrthoFinder
Sro1329_g263290.1 Contig1121.g10730 Helicase 0.02 OrthoFinder
Sro1532_g280230.1 Contig2041.g17536 Helicase 0.02 OrthoFinder
SymbC1.scaffold12792.1 12792.1 Helicase-associated [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold2314.2 2314.2 Helicase/UvrB, N-terminal; Helicase-associated;... 0.02 OrthoFinder
TP01G07410.1 No alias Hypothetical protein 0.02 OrthoFinder
TP09G02680.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
CC GO:0030289 protein phosphatase 4 complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1902554 serine/threonine protein kinase complex IEP Enrichment
CC GO:1902911 protein kinase complex IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
CC GO:1990316 Atg1/ULK1 kinase complex IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 513 597
IPR005114 Helicase_assoc 106 183
IPR005114 Helicase_assoc 711 784
IPR005114 Helicase_assoc 619 706
IPR005114 Helicase_assoc 796 870
IPR005114 Helicase_assoc 409 500
IPR005114 Helicase_assoc 240 285
No external refs found!