1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_22G01550.1

PTI_22G01550.1


Description : Domain of unknown function DUF382; PSP, proline-rich [Interproscan].


Gene families : OG_01_0003479 (OrthoFinder) Phylogenetic Tree(s): OG0003479_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_22G01550.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Cre12.g514450 30793601 RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder
EOD10297 No alias Domain of unknown function DUF382; PSP, proline-rich... 0.01 OrthoFinder
Sro614_g175720.1 Contig1589.g14426 Splicing factor 0.02 OrthoFinder
XM_003056947.1 MicpuC2_32583, 32583 Domain of unknown function DUF382; PSP, proline-rich... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006568 PSP_pro-rich 271 314
IPR007180 DUF382 134 260
No external refs found!