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  5. PTI_22G00630.1

PTI_22G00630.1


Description : RNase L inhibitor RLI, possible metal-binding domain; ABC transporter-like; 4Fe-4S ferredoxin-type, iron-sulphur binding domain [Interproscan].


Gene families : OG_01_0002778 (OrthoFinder) Phylogenetic Tree(s): OG0002778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_22G00630.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021517.10 tig00021517_g21995.t1 Protein biosynthesis.translation termination.ribosome... 0.02 OrthoFinder
Cre09.g409350 30781351, RLI1 Protein biosynthesis.translation termination.ribosome... 0.04 OrthoFinder
Dusal.0149s00008.1 33186647 ABC transporter-like; RNase L inhibitor RLI, possible... 0.02 OrthoFinder
EOD06665 No alias ABC transporter-like [Interproscan]. 0.03 OrthoFinder
OT_13G02840.1 No alias 4Fe-4S ferredoxin-type, iron-sulphur binding domain;... 0.04 OrthoFinder
Sro253_g099940.1 Contig3900.g29912 Sub-family E member 1 0.05 OrthoFinder
Transcript_contig_54225 54225 4Fe-4S ferredoxin-type, iron-sulphur binding domain;... 0.02 OrthoFinder
Vocar.0036s0015.1 32892295 ABC transporter-like; RNase L inhibitor RLI, possible... 0.02 OrthoFinder
XM_003058423.1 MicpuC2_68127, 68127 ABC transporter-like [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR017896 4Fe4S_Fe-S-bd 64 84
IPR003439 ABC_transporter-like_ATP-bd 116 264
IPR003439 ABC_transporter-like_ATP-bd 399 534
IPR007209 RNaseL-inhib-like_metal-bd_dom 20 51
No external refs found!