- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Zinc finger, RING-type [Interproscan].
Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_21G01960.1 | |
| Cluster | HCCA: Cluster_17 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro1292_g260020.1 | Contig3668.g28343 | Protein ligase Arkadia | 0.01 | OrthoFinder | |
| Sro492_g153750.1 | Contig2481.g20301 | Zinc ion binding | 0.04 | OrthoFinder | |
| Transcript_contig_1388 | 1388 | Hypothetical protein | 0.02 | OrthoFinder | |
| XM_002499639.1 | MICPUN_54017, 54017 | Zinc finger, RING-type [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005779 | integral component of peroxisomal membrane | IEP | Enrichment |
| CC | GO:0008303 | caspase complex | IEP | Enrichment |
| MF | GO:0008418 | protein-N-terminal asparagine amidohydrolase activity | IEP | Enrichment |
| BP | GO:0009143 | nucleoside triphosphate catabolic process | IEP | Enrichment |
| BP | GO:0016255 | attachment of GPI anchor to protein | IEP | Enrichment |
| BP | GO:0016559 | peroxisome fission | IEP | Enrichment |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Enrichment |
| MF | GO:0019239 | deaminase activity | IEP | Enrichment |
| CC | GO:0031231 | intrinsic component of peroxisomal membrane | IEP | Enrichment |
| CC | GO:0031300 | intrinsic component of organelle membrane | IEP | Enrichment |
| CC | GO:0031301 | integral component of organelle membrane | IEP | Enrichment |
| CC | GO:0042765 | GPI-anchor transamidase complex | IEP | Enrichment |
| MF | GO:0047429 | nucleoside-triphosphate diphosphatase activity | IEP | Enrichment |
| BP | GO:0048285 | organelle fission | IEP | Enrichment |
| BP | GO:1901292 | nucleoside phosphate catabolic process | IEP | Enrichment |
| CC | GO:1905369 | endopeptidase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 271 | 312 |
| No external refs found! |