PTI_21G01270.1

Description : Formate-tetrahydrofolate ligase, FTHFS [Interproscan].

Gene families : OG_01_0002114 (OrthoFinder) Phylogenetic Tree(s): OG0002114_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: PTI_21G01270.1
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001424.9	tig00001424_g8708.t1	Coenzyme metabolism.tetrahydrofolate...	0.03	OrthoFinder
Cre13.g566000	30783932	Coenzyme metabolism.tetrahydrofolate...	0.03	OrthoFinder
Sro346_g122630.1	Contig4731.g35090	Formate--tetrahydrofolate ligase	0.02	OrthoFinder
TP03G05430.1	No alias	Formate-tetrahydrofolate ligase, FTHFS [Interproscan].	0.07	OrthoFinder
Vocar.0028s0103.1	32895628	Formate-tetrahydrofolate ligase, FTHFS [Interproscan].	0.02	OrthoFinder
XM_002500621.1	MICPUN_93776, 93776	Formate-tetrahydrofolate ligase, FTHFS [Interproscan].	0.04	OrthoFinder
lcl\|BLLF01001284.1_cds_GFH18321.1_12798	HaLaN_15103, GFH18321	Formate-tetrahydrofolate ligase, FTHFS [Interproscan].	0.04	OrthoFinder
lcl\|BLLF01007116.1_cds_GFH32776.1_27253	HaLaN_32056, GFH32776	Formate tetrahyrofolate ligase	0.02	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8498784.1_7737	KAA8498784	Formate--tetrahydrofolate ligase	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004329	formate-tetrahydrofolate ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Enrichment
MF	GO:0004089	carbonate dehydratase activity	IEP	Enrichment
MF	GO:0004177	aminopeptidase activity	IEP	Enrichment
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	Enrichment
MF	GO:0008270	zinc ion binding	IEP	Enrichment
BP	GO:0010024	phytochromobilin biosynthetic process	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	Enrichment
MF	GO:0016829	lyase activity	IEP	Enrichment
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Enrichment
MF	GO:0016836	hydro-lyase activity	IEP	Enrichment
MF	GO:0016872	intramolecular lyase activity	IEP	Enrichment
CC	GO:0030120	vesicle coat	IEP	Enrichment
CC	GO:0030127	COPII vesicle coat	IEP	Enrichment
MF	GO:0043169	cation binding	IEP	Enrichment
MF	GO:0046872	metal ion binding	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
BP	GO:0048193	Golgi vesicle transport	IEP	Enrichment
MF	GO:0050897	cobalt ion binding	IEP	Enrichment
BP	GO:0051202	phytochromobilin metabolic process	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment
MF	GO:0070569	uridylyltransferase activity	IEP	Enrichment
MF	GO:0071949	FAD binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000559	Formate_THF_ligase	37	666

External Links

No external refs found!