Description : Formate-tetrahydrofolate ligase, FTHFS [Interproscan].

Gene families : OG_01_0002114 (OrthoFinder) Phylogenetic Tree(s): OG0002114_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: PTI_21G01270.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001424.9 tig00001424_g8708.t1 Coenzyme metabolism.tetrahydrofolate... 0.03 OrthoFinder
Cre13.g566000 30783932 Coenzyme metabolism.tetrahydrofolate... 0.03 OrthoFinder
Sro346_g122630.1 Contig4731.g35090 Formate--tetrahydrofolate ligase 0.02 OrthoFinder
TP03G05430.1 No alias Formate-tetrahydrofolate ligase, FTHFS [Interproscan]. 0.07 OrthoFinder
Vocar.0028s0103.1 32895628 Formate-tetrahydrofolate ligase, FTHFS [Interproscan]. 0.02 OrthoFinder
XM_002500621.1 MICPUN_93776, 93776 Formate-tetrahydrofolate ligase, FTHFS [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01001284.1_cds_GFH18321.1_12798 HaLaN_15103, GFH18321 Formate-tetrahydrofolate ligase, FTHFS [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01007116.1_cds_GFH32776.1_27253 HaLaN_32056, GFH32776 Formate tetrahyrofolate ligase 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498784.1_7737 KAA8498784 Formate--tetrahydrofolate ligase 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004329 formate-tetrahydrofolate ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0010024 phytochromobilin biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
MF GO:0050897 cobalt ion binding IEP Enrichment
BP GO:0051202 phytochromobilin metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR000559 Formate_THF_ligase 37 666
No external refs found!