1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_21G00830.1

PTI_21G00830.1


Description : Ribosomal protein S26e [Interproscan].


Gene families : OG_01_0002849 (OrthoFinder) Phylogenetic Tree(s): OG0002849_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_21G00830.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001486.9 tig00001486_g8926.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder
Cre16.g682300 30776938, RPS26 Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder
Cz08g12070.t1 No alias Ribosomal protein S26e [Interproscan]. 0.05 OrthoFinder
EOD22215 No alias Ribosomal protein S26e [Interproscan]. 0.05 OrthoFinder
OT_02G02540.1 No alias Ribosomal protein S26e [Interproscan]. 0.05 OrthoFinder
Sro1334_g263860.1 Contig785.g8790 40S ribosomal protein S26 0.07 OrthoFinder
Transcript_contig_79948 79948 Ribosomal protein S26e [Interproscan]. 0.01 OrthoFinder
Vocar.0018s0140.1 32898717 Ribosomal protein S26e [Interproscan]. 0.04 OrthoFinder
XM_002504425.1 MICPUN_61082, 61082 Ribosomal protein S26e [Interproscan]. 0.03 OrthoFinder
XM_003059864.1 MicpuC2_27736, 27736 Ribosomal protein S26e [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01001764.1_cds_GFH21111.1_15588 HaLaN_18351, GFH21111 40S ribosomal protein S26 0.03 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57833.1_8259 PRW57833 40S ribosomal S26 0.03 OrthoFinder
lcl|VRMN01000031.1_cds_KAA8490355.1_5745 KAA8490355 40S ribosomal protein S26-B 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004451 isocitrate lyase activity IEP Enrichment
MF GO:0004474 malate synthase activity IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006097 glyoxylate cycle IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
BP GO:0030099 myeloid cell differentiation IEP Enrichment
BP GO:0030154 cell differentiation IEP Enrichment
BP GO:0030218 erythrocyte differentiation IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0046487 glyoxylate metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0048869 cellular developmental process IEP Enrichment
CC GO:0061617 MICOS complex IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000892 Ribosomal_S26e 1 103
No external refs found!