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  5. PTI_20G02980.1

PTI_20G02980.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000022 (OrthoFinder) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_20G02980.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
PTI_00G00760.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_00G00820.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_00G00830.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_00G00840.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_00G01680.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_00G01910.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_00G02780.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_00G03300.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_00G03350.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_00G03380.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_00G03760.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_00G03770.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_00G03790.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_02G00010.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_04G00230.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_05G04500.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_06G03570.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_06G05180.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_07G04550.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_08G00940.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_08G04530.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_08G04540.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_10G00130.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_11G00100.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_11G00140.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_11G00170.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_11G00180.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_11G04480.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_13G00100.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_13G00110.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_13G00130.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_13G02530.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_14G01280.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_14G01290.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_14G01300.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_14G02440.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_16G00060.1 No alias Dehydrogenase, E1 component; Reverse transcriptase,... 0.03 OrthoFinder
PTI_17G02980.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_18G00350.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_22G00420.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_22G00450.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_26G00310.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_29G00100.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_29G00620.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_30G00040.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_30G00090.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_31G00150.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_31G00160.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_31G00170.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_33G00010.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_33G00260.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 417 620
No external refs found!