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  5. PTI_20G02560.1

PTI_20G02560.1


Description : cDENN domain; WD40 repeat [Interproscan].


Gene families : OG_01_0020381 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_20G02560.1
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Sro484_g152240.1 Contig2684.g21695 DENN domain-containing protein 5B 0.04 OrthoFinder
TP19G02070.1 No alias WD40 repeat; SBF1/SBF2 domain; cDENN domain [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
InterPro domains Description Start Stop
IPR001194 cDENN_dom 1201 1398
IPR001680 WD40_repeat 2331 2367
IPR001680 WD40_repeat 2455 2492
IPR001680 WD40_repeat 2413 2449
No external refs found!