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  5. PTI_20G01800.1

PTI_20G01800.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000022 (OrthoFinder) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_20G01800.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
PTI_00G00820.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_00G03300.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_00G03380.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_00G03760.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_00G03790.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_02G04470.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_04G00230.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_05G04500.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_08G00940.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_08G04530.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_08G04540.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_10G00130.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_11G00060.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_11G00100.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_11G00140.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_11G04480.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_13G00100.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_13G00110.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_13G00130.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_14G02130.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_18G00350.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_22G00420.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_24G01610.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_29G00100.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_30G00040.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_31G00170.1 No alias Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 849 1052
No external refs found!