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  5. PTI_20G01740.1

PTI_20G01740.1


Description : SANT/Myb domain [Interproscan].


Gene families : OG_01_0000018 (OrthoFinder) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_20G01740.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020780.48 tig00020780_g13797.t2 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder
Cz10g24240.t1 No alias SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
Sro87_g046050.1 Contig2014.g17213 Myb-related protein A 0.03 OrthoFinder
Transcript_contig_57499 57499 SANT/Myb domain [Interproscan]. 0.01 OrthoFinder
Vocar.0001s1620.1 32884611 SANT/Myb domain [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498587.1_7540 KAA8498587 Myb-related protein A 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004743 pyruvate kinase activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR001005 SANT/Myb 271 323
IPR001005 SANT/Myb 414 459
IPR001005 SANT/Myb 359 403
IPR001005 SANT/Myb 465 508
No external refs found!