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  5. PTI_20G00860.1

PTI_20G00860.1


Description : gag-polypeptide of LTR copia-type [Interproscan].


Gene families : OG_01_0000023 (OrthoFinder) Phylogenetic Tree(s): OG0000023_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_20G00860.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
PTI_10G02830.1 No alias Integrase, catalytic core; gag-polypeptide of LTR... 0.03 OrthoFinder
PTI_12G03100.1 No alias Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!