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  5. PTI_20G00280.1

PTI_20G00280.1


Description : Carbamoyl-phosphate synthetase, large subunit oligomerisation domain; Methylglyoxal synthase-like domain; Carbamoyl-phosphate synthase small subunit, N-terminal domain; Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain; Glutamine amidotransferase [Interproscan].


Gene families : OG_01_0000742 (OrthoFinder) Phylogenetic Tree(s): OG0000742_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: PTI_20G00280.1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Sro2246_g320570.1 Contig1042.g10302 Carbamoyl-phosphate synthase large chain 0.05 OrthoFinder
Sro3521_g348890.1 Contig4377.g32917 Carbamoyl-phosphate synthase large chain 0.08 OrthoFinder
SymbC1.scaffold1.650 1.650 Carbamoyl-phosphate synthetase, large subunit... 0.01 OrthoFinder
lcl|BLLF01003360.1_cds_GFH27131.1_21608 HaLaN_25400, GFH27131 Carbamoyl-phosphate synthase large chain 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR017926 GATASE 174 352
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 1100 1293
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 503 704
IPR002474 CarbamoylP_synth_ssu_N 2 126
IPR011607 MGS-like_dom 1385 1477
IPR005480 CarbamoylP_synth_lsu_oligo 797 927
No external refs found!