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Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].
Gene families : OG_01_0000022 (OrthoFinder) Phylogenetic Tree(s): OG0000022_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_19G02870.1 | |
| Cluster | HCCA: Cluster_15 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| PTI_00G00820.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_00G01680.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_00G01910.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_00G02780.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_00G03300.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_00G03370.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_00G03380.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_00G03760.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_00G03770.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_00G03790.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_02G04470.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.04 | OrthoFinder | |
| PTI_04G00230.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_05G04500.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_06G05180.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_07G04550.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_08G00940.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_08G04530.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_08G04540.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_10G00130.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_11G00100.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_11G00140.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_11G00170.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_11G04480.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_13G00100.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_13G00110.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_13G00130.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_14G01290.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_14G02130.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.04 | OrthoFinder | |
| PTI_14G02440.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_18G00350.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_22G00420.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_22G00450.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_24G01610.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_26G00320.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_27G00080.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.04 | OrthoFinder | |
| PTI_29G00100.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_30G00040.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_30G00090.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_31G00170.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004112 | cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0006817 | phosphate ion transport | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Enrichment |
| MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009187 | cyclic nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009190 | cyclic nucleotide biosynthetic process | IEP | Enrichment |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
| MF | GO:0019825 | oxygen binding | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Enrichment |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013103 | RVT_2 | 849 | 1052 |
| No external refs found! |