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  5. PTI_19G02220.1

PTI_19G02220.1


Description : ABC transporter type 1, transmembrane domain; ABC transporter-like [Interproscan].


Gene families : OG_01_0000221 (OrthoFinder) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_19G02220.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001368.15 tig00001368_g8414.t1 ABC transporter D family member 2, chloroplastic... 0.02 OrthoFinder
Cpa|evm.model.tig00021326.43 tig00021326_g20308.t1 Solute transport.primary active transport.ABC... 0.01 OrthoFinder
SymbC1.scaffold3827.1 3827.1 ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
Transcript_contig_54233 54233 ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Transcript_contig_58953 58953 ABC transporter type 1, transmembrane domain [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497602.1_6555 KAA8497602 Putative ABC transporter ATP-binding protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004340 glucokinase activity IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
MF GO:0004396 hexokinase activity IEP Enrichment
MF GO:0004560 alpha-L-fucosidase activity IEP Enrichment
MF GO:0005536 glucose binding IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
MF GO:0015928 fucosidase activity IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 147 403
IPR003439 ABC_transporter-like_ATP-bd 528 693
No external refs found!