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  5. PTI_18G00080.1

PTI_18G00080.1


Description : Zinc finger, CCHC-type [Interproscan].


Gene families : OG_01_0004731 (OrthoFinder) Phylogenetic Tree(s): OG0004731_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: PTI_18G00080.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
PTI_01G01480.1 No alias Integrase, catalytic core; Reverse transcriptase,... 0.15 OrthoFinder
PTI_01G08460.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_01G08470.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_01G08480.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_03G01790.1 No alias Zinc finger, CCHC-type [Interproscan]. 0.1 OrthoFinder
PTI_07G01100.1 No alias Zinc finger, CCHC-type [Interproscan]. 0.16 OrthoFinder
PTI_28G00010.1 No alias Zinc finger, CCHC-type [Interproscan]. 0.16 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 223 238
No external refs found!