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  5. PTI_18G00030.1

PTI_18G00030.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000022 (OrthoFinder) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_18G00030.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
PTI_00G00820.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_00G01670.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_00G03300.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G03780.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_00G03790.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_01G04550.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_04G05890.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_05G00050.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_05G04500.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_07G00160.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_07G01130.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_08G04530.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_08G04540.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_08G04560.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_08G04590.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_09G04600.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_11G00100.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_11G00140.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_11G04480.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_11G04500.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_13G00100.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_13G00110.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_13G00130.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_14G01300.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_18G00120.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_18G00340.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_18G00350.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_19G03130.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_20G00020.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_21G02780.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_22G00420.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_26G00300.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_26G01640.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_29G00120.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_29G01330.1 No alias 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.05 OrthoFinder
PTI_30G00040.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_31G00140.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_31G00160.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_31G00170.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_31G01010.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_33G00190.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 38 232
No external refs found!