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  5. PTI_17G02980.1

PTI_17G02980.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000022 (OrthoFinder) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_17G02980.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
PTI_00G00760.1 No alias Hypothetical protein 0.16 OrthoFinder
PTI_00G00820.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_00G01270.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_00G01930.1 No alias Hypothetical protein 0.19 OrthoFinder
PTI_00G02820.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_00G03370.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_00G03380.1 No alias Hypothetical protein 0.13 OrthoFinder
PTI_01G04550.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_01G05400.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_02G04470.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.1 OrthoFinder
PTI_03G04560.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_04G00240.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_05G04500.1 No alias Hypothetical protein 0.17 OrthoFinder
PTI_07G00170.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
PTI_07G01130.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_07G04530.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_07G04540.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_08G04540.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_08G04560.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_08G04590.1 No alias Hypothetical protein 0.16 OrthoFinder
PTI_10G00130.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.16 OrthoFinder
PTI_11G00060.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_11G00070.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_11G04500.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_11G04530.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_13G00100.1 No alias Hypothetical protein 0.18 OrthoFinder
PTI_13G00120.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_13G00130.1 No alias Hypothetical protein 0.13 OrthoFinder
PTI_14G02130.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.11 OrthoFinder
PTI_14G02460.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_16G00070.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_18G00120.1 No alias Hypothetical protein 0.17 OrthoFinder
PTI_18G00350.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_18G00360.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_18G00370.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_19G03130.1 No alias Hypothetical protein 0.15 OrthoFinder
PTI_20G02980.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_21G02780.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_24G01610.1 No alias Hypothetical protein 0.17 OrthoFinder
PTI_25G00010.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_26G00300.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_26G00320.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_27G00290.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_29G00120.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_29G00130.1 No alias Hypothetical protein 0.17 OrthoFinder
PTI_29G01330.1 No alias 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.04 OrthoFinder
PTI_30G00050.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
PTI_31G00170.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_31G01010.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 781 953
No external refs found!