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  5. PTI_17G01590.1

PTI_17G01590.1


Description : XPG N-terminal; XPG-I domain [Interproscan].


Gene families : OG_01_0002273 (OrthoFinder) Phylogenetic Tree(s): OG0002273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_17G01590.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Cre10.g429050 30790690 DNA repair protein UVH3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz01g30240.t1 No alias XPG N-terminal; XPG-I domain [Interproscan]. 0.02 OrthoFinder
EOD32000 No alias XPG N-terminal [Interproscan]. 0.02 OrthoFinder
EOD32001 No alias XPG-I domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030906 retromer, cargo-selective complex IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
MF GO:0042393 histone binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043531 ADP binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR006086 XPG-I_dom 1056 1139
IPR006085 XPG_DNA_repair_N 1 98
No external refs found!