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Description : Chlorophyll A-B binding protein [Interproscan].
Gene families : OG_01_0000059 (OrthoFinder) Phylogenetic Tree(s): OG0000059_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_17G01330.1 | |
| Cluster | HCCA: Cluster_8 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| EOD04043 | No alias | Light harvesting protein [Ensembl]. | 0.07 | OrthoFinder | |
| EOD04179 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.08 | OrthoFinder | |
| EOD06381 | No alias | Light harvesting protein [Ensembl]. | 0.07 | OrthoFinder | |
| EOD08888 | No alias | Light harvesting protein [Ensembl]. | 0.05 | OrthoFinder | |
| EOD09088 | No alias | Light harvesting protein [Ensembl]. | 0.07 | OrthoFinder | |
| EOD13767 | No alias | Light harvesting protein [Ensembl]. | 0.08 | OrthoFinder | |
| EOD16168 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| EOD17483 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD24357 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
| EOD28786 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD29856 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD30102 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
| EOD31146 | No alias | Light harvesting protein [Ensembl]. | 0.05 | OrthoFinder | |
| EOD32547 | No alias | Light harvesting protein [Ensembl]. | 0.05 | OrthoFinder | |
| EOD35505 | No alias | Light harvesting protein [Ensembl]. | 0.06 | OrthoFinder | |
| EOD38673 | No alias | Lught harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
| EOD41827 | No alias | Light harvesting protein [Ensembl]. | 0.05 | OrthoFinder | |
| Sro1043_g234820.1 | Contig3084.g24573 | Fucoxanthin-chlorophyll a-c binding protein | 0.19 | OrthoFinder | |
| Sro125_g060100.1 | Contig2833.g22721 | Fucoxanthin-chlorophyll a-c binding protein | 0.23 | OrthoFinder | |
| Sro1292_g260030.1 | Contig3668.g28344 | Fucoxanthin-chlorophyll a-c binding protein | 0.02 | OrthoFinder | |
| Sro1292_g260040.1 | Contig3668.g28345 | Fucoxanthin-chlorophyll a-c binding protein | 0.23 | OrthoFinder | |
| Sro137_g064500.1 | Contig3969.g30465 | Fucoxanthin-chlorophyll a-c binding protein | 0.22 | OrthoFinder | |
| Sro1418_g271000.1 | Contig4752.g35216 | Fucoxanthin-chlorophyll a-c binding protein | 0.24 | OrthoFinder | |
| Sro1451_g273830.1 | Contig4314.g32534 | Fucoxanthin-chlorophyll a-c binding protein | 0.22 | OrthoFinder | |
| Sro147_g067990.1 | Contig246.g3022 | Chloroplastic | 0.21 | OrthoFinder | |
| Sro2004_g310410.1 | Contig2826.g22657 | Fucoxanthin-chlorophyll a-c binding protein | 0.21 | OrthoFinder | |
| Sro2330_g323570.1 | Contig817.g9103 | Fucoxanthin-chlorophyll a-c binding protein | 0.19 | OrthoFinder | |
| Sro238_g095650.1 | Contig99.g1211 | Fucoxanthin-chlorophyll a-c binding protein | 0.21 | OrthoFinder | |
| Sro267_g103520.1 | Contig4506.g33814 | Fucoxanthin-chlorophyll a-c binding protein | 0.19 | OrthoFinder | |
| Sro267_g103540.1 | Contig4506.g33816 | Fucoxanthin-chlorophyll a-c binding protein | 0.22 | OrthoFinder | |
| Sro2721_g335500.1 | Contig3512.g27204 | Fucoxanthin-chlorophyll a-c binding protein | 0.21 | OrthoFinder | |
| Sro31_g020150.1 | Contig420.g5610 | Fucoxanthin-chlorophyll a-c binding protein A, chloroplastic | 0.23 | OrthoFinder | |
| Sro326_g118250.1 | Contig1080.g10513 | Fucoxanthin-chlorophyll a-c binding protein | 0.2 | OrthoFinder | |
| Sro367_g127810.1 | Contig623.g7606 | Fucoxanthin-chlorophyll a-c binding protein | 0.24 | OrthoFinder | |
| Sro376_g129680.1 | Contig3640.g28118 | Fucoxanthin-chlorophyll a-c binding protein | 0.22 | OrthoFinder | |
| Sro43_g026030.1 | Contig2453.g20069 | Fucoxanthin-chlorophyll a-c binding protein | 0.22 | OrthoFinder | |
| Sro518_g158860.1 | Contig3565.g27541 | Chloroplastic | 0.22 | OrthoFinder | |
| Sro533_g161680.1 | Contig3819.g29336 | Fucoxanthin-chlorophyll a-c binding protein | 0.19 | OrthoFinder | |
| Sro566_g167740.1 | Contig3739.g28669 | Fucoxanthin-chlorophyll a-c binding protein | 0.23 | OrthoFinder | |
| Sro6_g005380.1 | Contig175.g2043 | Fucoxanthin-chlorophyll a-c binding protein | 0.2 | OrthoFinder | |
| Sro6_g005400.1 | Contig175.g2045 | Fucoxanthin-chlorophyll a-c binding protein | 0.21 | OrthoFinder | |
| Sro720_g192680.1 | Contig2421.g19829 | Fucoxanthin-chlorophyll a-c binding protein | 0.2 | OrthoFinder | |
| Sro773_g200470.1 | Contig1379.g12690 | Fucoxanthin-chlorophyll a-c binding protein | 0.2 | OrthoFinder | |
| Sro7_g006410.1 | Contig389.g5294 | Fucoxanthin-chlorophyll a-c binding protein | 0.23 | OrthoFinder | |
| Sro823_g207590.1 | Contig3379.g26446 | Fucoxanthin-chlorophyll a-c binding protein | 0.24 | OrthoFinder | |
| SymbC1.scaffold5657.2 | 5657.2 | Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
| SymbC1.scaffold6938.2 | 6938.2 | Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
| TP01G10180.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.15 | OrthoFinder | |
| TP02G08060.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.18 | OrthoFinder | |
| TP03G01950.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.18 | OrthoFinder | |
| TP03G01960.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.17 | OrthoFinder | |
| TP05G02100.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.18 | OrthoFinder | |
| TP20G01530.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.17 | OrthoFinder | |
| TP20G01560.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.19 | OrthoFinder | |
| TP22G01060.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.16 | OrthoFinder | |
| TP22G02570.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.15 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004655 | porphobilinogen synthase activity | IEP | Enrichment |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Enrichment |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Enrichment |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Enrichment |
| BP | GO:0006721 | terpenoid metabolic process | IEP | Enrichment |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0006801 | superoxide metabolic process | IEP | Enrichment |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Enrichment |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Enrichment |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| CC | GO:0009521 | photosystem | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
| BP | GO:0010024 | phytochromobilin biosynthetic process | IEP | Enrichment |
| BP | GO:0010109 | regulation of photosynthesis | IEP | Enrichment |
| BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
| MF | GO:0010242 | oxygen evolving activity | IEP | Enrichment |
| BP | GO:0015979 | photosynthesis | IEP | Enrichment |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Enrichment |
| BP | GO:0015995 | chlorophyll biosynthetic process | IEP | Enrichment |
| BP | GO:0016114 | terpenoid biosynthetic process | IEP | Enrichment |
| MF | GO:0016209 | antioxidant activity | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Enrichment |
| MF | GO:0016636 | oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | IEP | Enrichment |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | Enrichment |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Enrichment |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Enrichment |
| MF | GO:0016829 | lyase activity | IEP | Enrichment |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Enrichment |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
| MF | GO:0016853 | isomerase activity | IEP | Enrichment |
| MF | GO:0016854 | racemase and epimerase activity | IEP | Enrichment |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Enrichment |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Enrichment |
| MF | GO:0020037 | heme binding | IEP | Enrichment |
| BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
| MF | GO:0032977 | membrane insertase activity | IEP | Enrichment |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Enrichment |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | Enrichment |
| BP | GO:0042549 | photosystem II stabilization | IEP | Enrichment |
| BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | Enrichment |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Enrichment |
| MF | GO:0046406 | magnesium protoporphyrin IX methyltransferase activity | IEP | Enrichment |
| MF | GO:0046429 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | IEP | Enrichment |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Enrichment |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
| MF | GO:0050897 | cobalt ion binding | IEP | Enrichment |
| BP | GO:0051202 | phytochromobilin metabolic process | IEP | Enrichment |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Enrichment |
| MF | GO:0052592 | oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Enrichment |
| MF | GO:0098809 | nitrite reductase activity | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 37 | 190 |
| No external refs found! |