PTI_17G00580.1

Description : Cullin protein, neddylation domain; Cullin, N-terminal [Interproscan].

Gene families : OG_01_0000229 (OrthoFinder) Phylogenetic Tree(s): OG0000229_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: PTI_17G00580.1
Cluster	HCCA: Cluster_92

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000157.110	tig00000157_g9709.t1	Cullin-4 OS=Arabidopsis thaliana	0.02	OrthoFinder
Dusal.0203s00008.1	33199265	Cullin protein, neddylation domain; Cullin, N-terminal...	0.02	OrthoFinder
TP01G02840.1	No alias	Cullin protein, neddylation domain; Cullin, N-terminal...	0.02	OrthoFinder
TP05G00980.1	No alias	Cullin protein, neddylation domain; Cullin, N-terminal...	0.03	OrthoFinder
TP20G01090.1	No alias	Cullin protein, neddylation domain; Cullin, N-terminal...	0.02	OrthoFinder
Transcript_contig_54536	54536	Cullin protein, neddylation domain; Cullin, N-terminal...	0.03	OrthoFinder
lcl\|VRMN01000007.1_cds_KAA8493347.1_9648	KAA8493347	Cullin-3A	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
MF	GO:0031625	ubiquitin protein ligase binding	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
MF	GO:0044389	ubiquitin-like protein ligase binding	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0004180	carboxypeptidase activity	IEP	Enrichment
MF	GO:0004181	metallocarboxypeptidase activity	IEP	Enrichment
MF	GO:0005049	nuclear export signal receptor activity	IEP	Enrichment
CC	GO:0005643	nuclear pore	IEP	Enrichment
BP	GO:0006270	DNA replication initiation	IEP	Enrichment
BP	GO:0006405	RNA export from nucleus	IEP	Enrichment
BP	GO:0006406	mRNA export from nucleus	IEP	Enrichment
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Enrichment
BP	GO:0006886	intracellular protein transport	IEP	Enrichment
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	Enrichment
BP	GO:0006913	nucleocytoplasmic transport	IEP	Enrichment
BP	GO:0008104	protein localization	IEP	Enrichment
MF	GO:0008235	metalloexopeptidase activity	IEP	Enrichment
MF	GO:0008270	zinc ion binding	IEP	Enrichment
BP	GO:0015031	protein transport	IEP	Enrichment
BP	GO:0016192	vesicle-mediated transport	IEP	Enrichment
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Enrichment
BP	GO:0016973	poly(A)+ mRNA export from nucleus	IEP	Enrichment
CC	GO:0030173	integral component of Golgi membrane	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
CC	GO:0031228	intrinsic component of Golgi membrane	IEP	Enrichment
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Enrichment
CC	GO:0031301	integral component of organelle membrane	IEP	Enrichment
BP	GO:0033036	macromolecule localization	IEP	Enrichment
BP	GO:0045184	establishment of protein localization	IEP	Enrichment
BP	GO:0046486	glycerolipid metabolic process	IEP	Enrichment
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Enrichment
BP	GO:0046907	intracellular transport	IEP	Enrichment
BP	GO:0048193	Golgi vesicle transport	IEP	Enrichment
BP	GO:0050657	nucleic acid transport	IEP	Enrichment
BP	GO:0050658	RNA transport	IEP	Enrichment
BP	GO:0051028	mRNA transport	IEP	Enrichment
BP	GO:0051168	nuclear export	IEP	Enrichment
BP	GO:0051169	nuclear transport	IEP	Enrichment
BP	GO:0051236	establishment of RNA localization	IEP	Enrichment
BP	GO:0051641	cellular localization	IEP	Enrichment
BP	GO:0051649	establishment of localization in cell	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment
BP	GO:0071705	nitrogen compound transport	IEP	Enrichment
MF	GO:0140104	molecular carrier activity	IEP	Enrichment
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	Enrichment
MF	GO:0140597	protein carrier activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001373	Cullin_N	28	644
IPR019559	Cullin_neddylation_domain	692	753

External Links

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PTI_17G00580.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation