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  4. Sequence
  5. PTI_17G00090.1

PTI_17G00090.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000066 (OrthoFinder) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_17G00090.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
PTI_00G01000.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_00G01600.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_00G01840.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_00G01920.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_00G02470.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_00G04600.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_00G04610.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_01G01660.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_01G08070.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_01G08080.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_03G00490.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_03G05880.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_03G05910.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_03G05970.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_04G00260.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_06G01810.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_06G02350.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_09G01550.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_09G01560.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_16G00750.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_16G02510.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_19G03110.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_20G00080.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_25G00030.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_31G00950.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 1305 1521
No external refs found!