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  5. PTI_16G00990.1

PTI_16G00990.1


Description : JmjC domain [Interproscan].


Gene families : OG_01_0000339 (OrthoFinder) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_16G00990.1
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Cre03.g169950 30788182 RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 OrthoFinder
Cz01g27150.t1 No alias Zinc finger, C5HC2-type; JmjC domain; JmjN domain [Interproscan]. 0.03 OrthoFinder
Cz10g25240.t1 No alias Lysine-specific demethylase-like domain; Zinc finger,... 0.02 OrthoFinder
Transcript_contig_54742 54742 JmjN domain; JmjC domain [Interproscan]. 0.02 OrthoFinder
Vocar.0009s0129.1 32893552 JmjC domain [Interproscan]. 0.02 OrthoFinder
Vocar.0021s0051.1 32895894 JmjC domain [Interproscan]. 0.02 OrthoFinder
XM_003056272.1 MicpuC2_55195, 55195 JmjN domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000025.1_cds_PRW20225.1_5721 PRW20225 Lysine-specific demethylase JMJ706 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
CC GO:0030289 protein phosphatase 4 complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003347 JmjC_dom 501 618
No external refs found!