1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_16G00900.1

PTI_16G00900.1


Description : Glycine cleavage system P protein [Interproscan].


Gene families : OG_01_0003122 (OrthoFinder) Phylogenetic Tree(s): OG0003122_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_16G00900.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cre12.g534800 30793415, GCSP Photosynthesis.photorespiration.glycine cleavage... 0.03 OrthoFinder
Cz05g11130.t1 No alias Glycine cleavage system P protein [Interproscan]. 0.04 OrthoFinder
OT_10G03190.1 No alias Glycine cleavage system P protein [Interproscan]. 0.05 OrthoFinder
Sro552_g165140.1 Contig2064.g17694 Glycine dehydrogenase (decarboxylating) 0.03 OrthoFinder
TP03G01310.1 No alias Glycine cleavage system P protein [Interproscan]. 0.04 OrthoFinder
Transcript_contig_53720 53720 Glycine cleavage system P protein [Interproscan]. 0.01 OrthoFinder
Vocar.0034s0106.1 32893075 Glycine cleavage system P protein [Interproscan]. 0.03 OrthoFinder
XM_002503431.1 MICPUN_104877, 104877 Glycine cleavage system p-protein (GCSP) 0.05 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56792.1_9671 PRW56792 Glycine cleavage system p 0.03 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495054.1_3584 KAA8495054 Glycine dehydrogenase (decarboxylating), mitochondrial 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEA Interproscan
BP GO:0006546 glycine catabolic process IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Enrichment
InterPro domains Description Start Stop
IPR020581 GDC_P 507 765
IPR020581 GDC_P 39 470
No external refs found!