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  5. PTI_16G00110.1

PTI_16G00110.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000066 (OrthoFinder) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_16G00110.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
PTI_00G01000.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_00G01070.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_00G02470.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_01G08070.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_01G11830.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_06G02350.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_09G01500.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_09G01560.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_11G00020.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_16G02510.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_18G02870.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_20G00080.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_24G01870.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_31G00950.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0005375 copper ion transmembrane transporter activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006825 copper ion transport IEP Enrichment
BP GO:0035434 copper ion transmembrane transport IEP Enrichment
MF GO:0043531 ADP binding IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 872 1009
No external refs found!