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Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].
Gene families : OG_01_0000066 (OrthoFinder) Phylogenetic Tree(s): OG0000066_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_16G00090.1 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| PTI_00G01000.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_00G01600.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.06 | OrthoFinder | |
| PTI_00G01920.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.02 | OrthoFinder | |
| PTI_00G02200.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_00G02470.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_00G04610.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_01G05240.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.06 | OrthoFinder | |
| PTI_01G08070.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_01G08080.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_01G11800.1 | No alias | Hypothetical protein | 0.08 | OrthoFinder | |
| PTI_03G00490.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_03G05890.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_03G05910.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_04G00260.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_06G02350.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_06G03610.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.1 | OrthoFinder | |
| PTI_09G01500.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_09G01520.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.11 | OrthoFinder | |
| PTI_09G01560.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_09G02870.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_09G02880.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_11G00020.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_13G00310.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.04 | OrthoFinder | |
| PTI_16G00080.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_16G00750.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.06 | OrthoFinder | |
| PTI_16G02500.1 | No alias | Hypothetical protein | 0.12 | OrthoFinder | |
| PTI_16G02510.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.05 | OrthoFinder | |
| PTI_17G02300.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_18G00100.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.11 | OrthoFinder | |
| PTI_18G02870.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_19G03110.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.12 | OrthoFinder | |
| PTI_20G00080.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_24G00370.1 | No alias | Hypothetical protein | 0.08 | OrthoFinder | |
| PTI_24G01650.1 | No alias | Hypothetical protein | 0.1 | OrthoFinder | |
| PTI_24G01870.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.05 | OrthoFinder | |
| PTI_25G00030.1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| PTI_29G00070.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.04 | OrthoFinder | |
| PTI_29G00090.1 | No alias | Glycoside hydrolase family 1; Reverse transcriptase,... | 0.03 | OrthoFinder | |
| PTI_31G00190.1 | No alias | Cobalamin (vitamin B12) biosynthesis CobW-like,... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Enrichment |
| MF | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | IEP | Enrichment |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | Enrichment |
| BP | GO:0006555 | methionine metabolic process | IEP | Enrichment |
| BP | GO:0006772 | thiamine metabolic process | IEP | Enrichment |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Enrichment |
| MF | GO:0008172 | S-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
| BP | GO:0009086 | methionine biosynthetic process | IEP | Enrichment |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | Enrichment |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0042085 | 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Enrichment |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013103 | RVT_2 | 693 | 908 |
| No external refs found! |